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DVU_1650 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1650" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1650Uncharacterized protein; Identified by similarity to SP-P45576 (374 aa)    
Predicted Functional Partners:
DVU_1651
Uncharacterized protein; Identified by similarity to OMNI-NTL01SM00387 (123 aa)
 
          0.917
DVU_1652
HIT family protein; Identified by match to protein family HMM PF01230 (174 aa)
              0.866
DVU_1653
Identified by similarity to SP-P42977; match to protein family HMM PF00571; match to protein family HMM PF01368; match to protein family HMM PF01743; match to protein family HMM PF02272 (904 aa)
              0.721
DVU_1654
Tyrosine recombinase XerC; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899 (294 aa)
              0.719
DVU_2516
CBS domain protein; Identified by match to protein family HMM PF00571 (161 aa)
 
          0.645
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (905 aa)
              0.638
DVU_1648
annotation not available (146 aa)
              0.620
DVU_0792
annotation not available (110 aa)
   
          0.609
DVU_2337
Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551 (383 aa)
 
          0.553
DVU_0584
Transposase, putative; Identified by similarity to OMNI-NTL01NM00438 (312 aa)
   
          0.521
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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