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DVU_1654 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1654" - Tyrosine recombinase XerC in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
DVU_1654Tyrosine recombinase XerC; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899 (294 aa)    
Predicted Functional Partners:
DVU_1653
Identified by similarity to SP-P42977; match to protein family HMM PF00571; match to protein family HMM PF01368; match to protein family HMM PF01743; match to protein family HMM PF02272 (904 aa)
         
  0.886
DVU_1652
HIT family protein; Identified by match to protein family HMM PF01230 (174 aa)
 
        0.778
modA
Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Identified by similarity to SP-P37329; match to protein family HMM PF01547; match to protein family HMM TIGR01256 (269 aa)
         
  0.734
DVU_1650
Uncharacterized protein; Identified by similarity to SP-P45576 (374 aa)
              0.719
DVU_0408
Response regulator/sensory box/GGDEF domain/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 (715 aa)
           
  0.715
DVU_1667
Identified by match to protein family HMM PF01580 (776 aa)
 
 
 
  0.684
DVU_2197
Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the ’phage’ integrase family (309 aa)
   
          0.675
DVU_1651
Uncharacterized protein; Identified by similarity to OMNI-NTL01SM00387 (123 aa)
              0.674
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (905 aa)
         
  0.607
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.588
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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