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DVU_1730 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1730" - Identified by match to protein family HMM PF01381 in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1730Identified by match to protein family HMM PF01381 (101 aa)    
Predicted Functional Partners:
DVU_1729
Killer protein, putative; Identified by similarity to GP-21203107; match to protein family HMM PF05015 (92 aa)
 
 
  0.999
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
         
  0.548
DVU_2022
Uncharacterized protein; Identified by similarity to GP-28629295 (1158 aa)
         
  0.541
DVU_1728
Uncharacterized protein; Identified by similarity to GP-16506030 (138 aa)
              0.433
DVU_1727
Uncharacterized protein; Identified by Glimmer2; putative (116 aa)
              0.433
DVU_1726
Uncharacterized protein; Identified by Glimmer2; putative (82 aa)
              0.433
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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