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DVU_1763 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1763" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1763Uncharacterized protein; Identified by Glimmer2; putative (51 aa)    
Predicted Functional Partners:
DVU_1764
Uncharacterized protein; Identified by similarity to OMNI-NTL01TT1482 (89 aa)
              0.623
DVU_1768
Identified by match to protein family HMM TIGR00231 (410 aa)
              0.559
DVU_1767
Radical SAM domain protein; Identified by match to protein family HMM PF04055 (322 aa)
              0.559
DVU_1766
Aspartate ammonia-lyase, putative; Identified by similarity to SP-P26899; match to protein family HMM PF00206 (470 aa)
              0.559
DVU_1765
ThiH protein, putative; Identified by similarity to SP-P30140; match to protein family HMM PF04055 (464 aa)
              0.559
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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