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DVU_1768 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1768" - Identified by match to protein family HMM TIGR00231 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_1768Identified by match to protein family HMM TIGR00231 (410 aa)    
Predicted Functional Partners:
DVU_1765
ThiH protein, putative; Identified by similarity to SP-P30140; match to protein family HMM PF04055 (464 aa)
     
  0.992
DVU_1767
Radical SAM domain protein; Identified by match to protein family HMM PF04055 (322 aa)
     
  0.992
DVU_1764
Uncharacterized protein; Identified by similarity to OMNI-NTL01TT1482 (89 aa)
 
          0.927
gidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family (629 aa)
   
 
  0.900
hydA
Periplasmic [Fe] hydrogenase large subunit; May be involved in hydrogen uptake for the reduction of sulfate to hydrogen sulfide in an electron transport chain. Cytochrome c3 is likely to be the physiological electron carrier for the enzyme (421 aa)
 
     
  0.896
hydB
Periplasmic [Fe] hydrogenase small subunit; May be involved in hydrogen uptake for the reduction of sulfate to hydrogen sulfide in an electron transport chain. Cytochrome c3 is likely to be the physiological electron carrier for the enzyme (123 aa)
 
     
  0.883
DVU_1766
Aspartate ammonia-lyase, putative; Identified by similarity to SP-P26899; match to protein family HMM PF00206 (470 aa)
              0.882
gidB
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA (218 aa)
   
   
  0.870
hydC
[Fe] hydrogenase gamma; Identified by similarity to GP-40828; match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906 (606 aa)
 
     
  0.830
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.608
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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