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hydB protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"hydB" - Periplasmic [Fe] hydrogenase small subunit in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
hydBPeriplasmic [Fe] hydrogenase small subunit; May be involved in hydrogen uptake for the reduction of sulfate to hydrogen sulfide in an electron transport chain. Cytochrome c3 is likely to be the physiological electron carrier for the enzyme (123 aa)    
Predicted Functional Partners:
hydA
Periplasmic [Fe] hydrogenase large subunit; May be involved in hydrogen uptake for the reduction of sulfate to hydrogen sulfide in an electron transport chain. Cytochrome c3 is likely to be the physiological electron carrier for the enzyme (421 aa)
 
 
 
  0.999
hydC
[Fe] hydrogenase gamma; Identified by similarity to GP-40828; match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906 (606 aa)
 
     
  0.940
DVU_1767
Radical SAM domain protein; Identified by match to protein family HMM PF04055 (322 aa)
 
 
  0.890
DVU_1768
Identified by match to protein family HMM TIGR00231 (410 aa)
 
     
  0.883
DVU_1765
ThiH protein, putative; Identified by similarity to SP-P30140; match to protein family HMM PF04055 (464 aa)
 
 
  0.875
DVU_3171
Cytochrome c3; Participates in sulfate respiration coupled with phosphorylation by transferring electrons from the enzyme dehydrogenase to ferredoxin (129 aa)
       
      0.800
cyf
Cytochrome c-553; Natural electron acceptor for a formate dehydrogenase (103 aa)
       
      0.800
DVU_1764
Uncharacterized protein; Identified by similarity to OMNI-NTL01TT1482 (89 aa)
 
          0.756
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
         
  0.568
DVU_2330
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (293 aa)
     
 
  0.529
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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