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DVU_1780 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1780" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1780Uncharacterized protein; Identified by similarity to OMNI-NTL01XC1623 (101 aa)    
Predicted Functional Partners:
DVU_1779
Uncharacterized protein; Identified by Glimmer2; putative (68 aa)
              0.668
DVU_1778
Cation efflux family protein; Identified by similarity to OMNI-CT0538; match to protein family HMM PF01545; match to protein family HMM TIGR01297; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family (481 aa)
              0.542
cynT
Carbonic anhydrase; Reversible hydration of carbon dioxide (245 aa)
              0.539
DVU_1782
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR00273 (475 aa)
              0.483
DVU_1783
Cysteine-rich domain protein; Identified by match to protein family HMM PF02754 (250 aa)
              0.480
DVU_1781
Uncharacterized protein; Identified by similarity to OMNI-NTL01NM01533; match to protein family HMM PF02589 (221 aa)
              0.480
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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