DVU_1802 protein (Desulfovibrio vulgaris Hildenborough)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0425	DVU_1802	DVU_0425	DVU_1802	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	0.526
DVU_1802	DVU_0425	DVU_1802	DVU_0425	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Hypothetical protein; Identified by Glimmer2; putative.	0.526
DVU_1802	msrB	DVU_1802	DVU_0576	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	0.521
DVU_1802	rplC	DVU_1802	DVU_1303	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.540
DVU_1802	rplL	DVU_1802	DVU_2927	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.532
DVU_1802	rplQ	DVU_1802	DVU_1330	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.521
DVU_1802	rplU	DVU_1802	DVU_0927	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.521
DVU_1802	rpmA	DVU_1802	DVU_0928	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Ribosomal protein L27; Identified by similarity to SP:P02427; match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.521
DVU_1802	rpmB	DVU_1802	DVU_1211	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.521
DVU_1802	rpmJ	DVU_1802	DVU_1325	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family.	0.521
DVU_1802	rpsP	DVU_1802	DVU_0839	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.	0.521
msrB	DVU_1802	DVU_0576	DVU_1802	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS2082.	0.521
msrB	rplC	DVU_0576	DVU_1303	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.479
msrB	rplL	DVU_0576	DVU_2927	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.521
msrB	rplQ	DVU_0576	DVU_1330	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.521
msrB	rplU	DVU_0576	DVU_0927	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.521
msrB	rpmA	DVU_0576	DVU_0928	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	Ribosomal protein L27; Identified by similarity to SP:P02427; match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.521
msrB	rpmB	DVU_0576	DVU_1211	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.521
msrB	rpmJ	DVU_0576	DVU_1325	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family.	0.576
msrB	rpsP	DVU_0576	DVU_0839	Peptide methionine sulfoxide reductase MsrB; Identified by similarity to SP:P14930; match to protein family HMM PF01641; match to protein family HMM TIGR00357.	Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.	0.521

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