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DVU_1827 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1827" - Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
DVU_1827Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01910 (407 aa)    
Predicted Functional Partners:
argD
Acetylornithine aminotransferase; Identified by similarity to SP-P54752; match to protein family HMM PF00202; match to protein family HMM TIGR00707 (399 aa)
   
 
  0.923
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (282 aa)
       
  0.916
gidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family (629 aa)
     
 
  0.909
dapL
LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate (388 aa)
       
  0.908
DVU_0367
Identified by match to protein family HMM PF00149 (244 aa)
   
          0.691
DVU_1826
Uncharacterized protein; Identified by Glimmer2; putative (90 aa)
              0.663
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (515 aa)
   
   
  0.581
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (607 aa)
   
 
  0.563
DVU_2517
Uncharacterized protein; Identified by similarity to OMNI-NTL01HP00646 (413 aa)
   
          0.492
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (162 aa)
     
      0.483
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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