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gmhA protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"gmhA" - Phosphoheptose isomerase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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gmhAPhosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (208 aa)    
Predicted Functional Partners:
DVU_1054
Hydrolase, HAD-superfamily, subfamily IIIA; Identified by match to protein family HMM TIGR01656; match to protein family HMM TIGR01662 (212 aa)
   
  0.989
DVU_0144
Cytidyltransferase-related domain protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose (200 aa)
     
  0.989
DVU_3361
ADP-heptose synthase, putative; Identified by similarity to GP-882153; match to protein family HMM PF00294 (341 aa)
     
  0.953
DVU_1055
Identified by match to protein family HMM PF01075 (344 aa)
 
 
 
  0.764
DVU_1956
Identified by match to protein family HMM PF01075 (351 aa)
 
 
 
  0.761
DVU_1625
Phosphatase, YrbI family; Identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01670 (175 aa)
   
 
  0.743
DVU_1256
Identified by match to protein family HMM PF01075 (362 aa)
 
 
 
  0.714
DVU_0411
Identified by match to protein family HMM PF01075 (557 aa)
 
 
 
  0.713
rfaD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily (323 aa)
 
   
  0.664
dnaA-2
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (491 aa)
       
 
  0.653
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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