STRINGSTRING
DVU_1891 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1891" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1891Uncharacterized protein; Identified by similarity to OMNI-NTL01NS1759; match to protein family HMM PF05143 (253 aa)    
Predicted Functional Partners:
DVU_1892
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (249 aa)
          0.996
DVU_0292
Uncharacterized protein; Identified by Glimmer2; putative (368 aa)
          0.938
DVU_1036
annotation not available (294 aa)
 
          0.648
DVU_1974
Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070 (367 aa)
 
          0.600
DVU_1893
Endopeptidase La; Identified by match to protein family HMM PF05362 (806 aa)
              0.583
DVU_1037
Mercuric reductase, putative; Identified by similarity to SP-P16171; match to protein family HMM PF00070; match to protein family HMM PF02852; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (480 aa)
 
          0.531
DVU_1823
Glutamate synthase, iron-sulfur cluster-binding subunit, putative; Identified by match to protein family HMM PF00037; match to protein family HMM PF01645 (507 aa)
       
      0.410
DVU_0697
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM TIGR01479; Belongs to the mannose-6-phosphate isomerase type 2 family (472 aa)
       
      0.410
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (18%) [HD]