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DVU_1901 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1901" - Peptidylprolyl isomerase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_1901Peptidylprolyl isomerase; Identified by match to protein family HMM PF00639 (348 aa)    
Predicted Functional Partners:
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (791 aa)
 
 
  0.871
DVU_1902
Uncharacterized protein; Identified by similarity to OMNI-NTL01YP0471 (312 aa)
 
       
0.823
DVU_1900
Uncharacterized protein; Identified by similarity to OMNI-NTL03PA03804 (313 aa)
         
  0.699
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (251 aa)
              0.697
mfd
Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site (1160 aa)
   
   
  0.697
glyQ
Glycine--tRNA ligase alpha subunit; Identified by match to protein family HMM PF02091; match to protein family HMM TIGR00388 (289 aa)
         
  0.686
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (260 aa)
   
 
  0.674
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.657
lptD
LPS-assembly protein LptD; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family (764 aa)
   
   
  0.644
glyS
Glycine--tRNA ligase beta subunit; Identified by match to protein family HMM PF02092; match to protein family HMM TIGR00211 (696 aa)
              0.611
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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