DVU_1973 protein (Desulfovibrio vulgaris Hildenborough)

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DVU_1973

Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. (282 aa)

Predicted Functional Partners:

DVU_1974

0.888

DVU_0665

0.642

sodB

0.630

DVU_1972

0.572

ybeY

0.565

rpsQ

0.548

rplQ

0.542

guaA

0.532

rplU

0.529

rplM

0.516

Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0665	DVU_1973	DVU_0665	DVU_1973	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.642
DVU_0665	sodB	DVU_0665	DVU_2410	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family.	Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.767
DVU_0665	ybeY	DVU_0665	DVU_1883	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.447
DVU_1972	DVU_1973	DVU_1972	DVU_1973	Hypothetical protein; Identified by Glimmer2; putative.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.572
DVU_1972	DVU_1974	DVU_1972	DVU_1974	Hypothetical protein; Identified by Glimmer2; putative.	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070.	0.572
DVU_1973	DVU_0665	DVU_1973	DVU_0665	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family.	0.642
DVU_1973	DVU_1972	DVU_1973	DVU_1972	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Hypothetical protein; Identified by Glimmer2; putative.	0.572
DVU_1973	DVU_1974	DVU_1973	DVU_1974	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070.	0.888
DVU_1973	guaA	DVU_1973	DVU_1043	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.532
DVU_1973	rplM	DVU_1973	DVU_2518	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.516
DVU_1973	rplQ	DVU_1973	DVU_1330	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.542
DVU_1973	rplU	DVU_1973	DVU_0927	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.529
DVU_1973	rpsQ	DVU_1973	DVU_1312	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.548
DVU_1973	sodB	DVU_1973	DVU_2410	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.630
DVU_1973	ybeY	DVU_1973	DVU_1883	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.565
DVU_1974	DVU_1972	DVU_1974	DVU_1972	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070.	Hypothetical protein; Identified by Glimmer2; putative.	0.572
DVU_1974	DVU_1973	DVU_1974	DVU_1973	Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.888
guaA	DVU_1973	DVU_1043	DVU_1973	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.	0.532
guaA	rplM	DVU_1043	DVU_2518	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.847
guaA	rplQ	DVU_1043	DVU_1330	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059.	0.720

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