| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_1979 | rplD | DVU_1979 | DVU_1304 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.790 |
| DVU_1979 | rplT | DVU_1979 | DVU_2535 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.798 |
| DVU_1979 | rplU | DVU_1979 | DVU_0927 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.804 |
| DVU_1979 | rpmA | DVU_1979 | DVU_0928 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein L27; Identified by similarity to SP:P02427; match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. | 0.791 |
| DVU_1979 | rpmD | DVU_1979 | DVU_1321 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308. | 0.796 |
| DVU_1979 | rpmH | DVU_1979 | DVU_1074 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family. | 0.789 |
| DVU_1979 | rpsG | DVU_1979 | DVU_1299 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.795 |
| DVU_1979 | rpsL | DVU_1979 | DVU_1298 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.788 |
| DVU_1979 | rpsO | DVU_1979 | DVU_0504 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.825 |
| DVU_1979 | rpsP | DVU_1979 | DVU_0839 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.785 |
| rplD | DVU_1979 | DVU_1304 | DVU_1979 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | ABC transporter, ATP-binding protein; Identified by similarity to SP:P43672; match to protein family HMM PF00005. | 0.790 |
| rplD | rplT | DVU_1304 | DVU_2535 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.994 |
| rplD | rplU | DVU_1304 | DVU_0927 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.993 |
| rplD | rpmA | DVU_1304 | DVU_0928 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosomal protein L27; Identified by similarity to SP:P02427; match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. | 0.992 |
| rplD | rpmD | DVU_1304 | DVU_1321 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308. | 0.996 |
| rplD | rpmH | DVU_1304 | DVU_1074 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family. | 0.952 |
| rplD | rpsG | DVU_1304 | DVU_1299 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.999 |
| rplD | rpsL | DVU_1304 | DVU_1298 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. | 0.999 |
| rplD | rpsO | DVU_1304 | DVU_0504 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
| rplD | rpsP | DVU_1304 | DVU_0839 | Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.990 |
