STRINGSTRING
DVU_2007 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2007" - Nuclease, putative in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
DVU_2007Nuclease, putative; Identified by match to protein family HMM PF00565 (138 aa)    
Predicted Functional Partners:
DVU_2006
Uncharacterized protein; Identified by Glimmer2; putative (51 aa)
              0.559
hrpB
ATP-dependent helicase HrpB; Identified by similarity to SP-P37024; match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM TIGR01970 (847 aa)
     
 
  0.487
DVU_2008
Uncharacterized protein; Identified by Glimmer2; putative (44 aa)
              0.453
ldh
L-lactate dehydrogenase; Identified by similarity to SP-P00345; match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; Belongs to the LDH/MDH superfamily. LDH family (309 aa)
   
 
  0.434
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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