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DVU_2030 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2030" - Identified by match to protein family HMM PF00665 in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2030Identified by match to protein family HMM PF00665 (280 aa)    
Predicted Functional Partners:
DVU_2029
Identified by match to protein family HMM PF01527 (132 aa)
   
  0.967
DVU_0718
ISDvu2, transposase OrfA; Identified by match to protein family HMM PF01527 (132 aa)
   
  0.796
DVU_1399
Identified by match to protein family HMM PF01527 (132 aa)
   
  0.796
AAS95198.1
Identified by match to protein family HMM PF01527 (132 aa)
   
  0.796
DVU_2028
Conserved domain protein; Identified by similarity to OMNI-NT01MC3723 (75 aa)
              0.617
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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