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DVU_2032 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2032" - ERF family protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2032ERF family protein; Identified by match to protein family HMM PF04404 (237 aa)    
Predicted Functional Partners:
DVU_2041
Uncharacterized protein; Identified by similarity to GP-20095150 (331 aa)
 
     
  0.788
DVU_2043
Uncharacterized protein; Identified by similarity to GP-20095140 (533 aa)
 
     
  0.756
DVU_2033
Uncharacterized protein; Identified by Glimmer2; putative (423 aa)
              0.656
DVU_2034
Uncharacterized protein; Identified by Glimmer2; putative (121 aa)
         
  0.650
DVU_0378
Thioredoxin, putative; Identified by similarity to SP-P80579 (104 aa)
   
          0.640
DVU_2037
CobS protein, putative; Identified by similarity to SP-P29933 (324 aa)
 
     
  0.635
DVU_0948
annotation not available (142 aa)
   
          0.556
DVU_0682
annotation not available (262 aa)
   
          0.529
DVU_0772
Uncharacterized protein; Identified by Glimmer2; putative (115 aa)
   
          0.483
DVU_1582
Uncharacterized protein; Identified by Glimmer2; putative (279 aa)
   
          0.439
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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