STRINGSTRING
DVU_2040 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2040" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2040Uncharacterized protein; Identified by Glimmer2; putative (95 aa)    
Predicted Functional Partners:
DVU_2039
Uncharacterized protein; Identified by Glimmer2; putative (91 aa)
              0.837
DVU_2041
Uncharacterized protein; Identified by similarity to GP-20095150 (331 aa)
              0.691
DVU_2042
Fic family protein; Identified by match to protein family HMM PF02661 (264 aa)
              0.668
DVU_2038
Uncharacterized protein; Identified by Glimmer2; putative (98 aa)
              0.625
DVU_2043
Uncharacterized protein; Identified by similarity to GP-20095140 (533 aa)
              0.507
DVU_2037
CobS protein, putative; Identified by similarity to SP-P29933 (324 aa)
              0.503
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (25%) [HD]