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DVU_2057 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2057" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_2057Uncharacterized protein; Identified by similarity to OMNI-EF2761; match to protein family HMM PF04468 (487 aa)    
Predicted Functional Partners:
rny
Ribonuclease Y; Endoribonuclease that initiates mRNA decay (519 aa)
 
          0.718
DVU_2059
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (330 aa)
     
      0.617
DVU_2058
HDIG domain protein; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277 (203 aa)
              0.571
DVU_2060
Uncharacterized protein; Identified by Glimmer2; putative (34 aa)
              0.543
DVU_2475
Oxidoreductase, NAD-binding, putative; Identified by match to protein family HMM PF00175 (280 aa)
 
          0.507
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor (330 aa)
 
     
  0.503
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (760 aa)
              0.448
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
 
          0.429
gltA
Glutamate synthase, small subunit; Identified by match to protein family HMM PF00070; match to protein family HMM TIGR01316 (476 aa)
 
          0.425
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (663 aa)
              0.424
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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