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DVU_2101 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2101" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
DVU_2101Uncharacterized protein; Identified by similarity to OMNI-CC1604; match to protein family HMM PF04357 (1783 aa)    
Predicted Functional Partners:
DVU_2102
Outer membrane protein, OMP85 family; Identified by match to protein family HMM PF01103 (776 aa)
 
 
  0.996
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
 
  0.742
DVU_3084
Transcriptional regulator, putative; Identified by similarity to SP-Q04152 (128 aa)
   
          0.569
DVU_2153
annotation not available (1346 aa)
   
 
  0.568
DVU_1486
annotation not available (770 aa)
   
 
  0.568
DVU_2527
Transcriptional regulator, putative; Identified by similarity to SP-P55323 (132 aa)
   
          0.558
DVU_3080
Transcriptional regulator, putative; Identified by similarity to SP-P55323 (132 aa)
   
          0.531
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (1079 aa)
   
 
  0.530
DVU_2383
TonB dependent receptor domain protein; Identified by match to protein family HMM PF00593 (875 aa)
     
 
  0.514
DVU_2100
Identified by match to protein family HMM PF00582; Belongs to the universal stress protein A family (138 aa)
              0.452
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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