STRINGSTRING
DVU_2103 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2103" - Iron-sulfur cluster-binding/ATPase domain protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2103Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991 (287 aa)    
Predicted Functional Partners:
DVU_2104
Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991 (301 aa)
 
 
 
0.989
DVU_2108
Identified by match to protein family HMM PF02579 (119 aa)
 
     
  0.967
DVU_2105
Uncharacterized protein; Identified by Glimmer2; putative (170 aa)
         
  0.922
DVU_2109
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (487 aa)
         
  0.807
DVU_2106
Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199 (458 aa)
         
  0.785
DVU_2107
Uncharacterized protein; Identified by Glimmer2; putative (183 aa)
         
  0.753
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
         
  0.565
DVU_2984
Uncharacterized protein; Identified by similarity to OMNI-NTL01AA00614; match to protein family HMM PF01937 (335 aa)
 
          0.539
DVU_3330
Uncharacterized protein; Identified by similarity to OMNI-NTL01TE1332 (91 aa)
           
  0.530
DVU_2215
Identified by match to protein family HMM PF00076 (89 aa)
           
  0.507
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (16%) [HD]