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DVU_2106 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2106" - Sigma-54 dependent transcriptional regulator in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DVU_2106Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199 (458 aa)    
Predicted Functional Partners:
DVU_2105
Uncharacterized protein; Identified by Glimmer2; putative (170 aa)
         
  0.873
DVU_2104
Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991 (301 aa)
         
  0.867
DVU_2107
Uncharacterized protein; Identified by Glimmer2; putative (183 aa)
         
  0.856
DVU_2108
Identified by match to protein family HMM PF02579 (119 aa)
         
  0.849
DVU_2109
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (487 aa)
         
  0.847
DVU_2103
Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991 (287 aa)
         
  0.785
DVU_2973
Integration host factor, beta subunit; Identified by similarity to SP-Q06607; match to protein family HMM PF00216 (91 aa)
           
  0.727
DVU_1864
DNA-binding protein HU, beta subunit, putative; Identified by similarity to SP-P08821; match to protein family HMM PF00216 (93 aa)
           
  0.727
hup-1
Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (95 aa)
           
  0.727
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (476 aa)
 
     
  0.718
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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