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DVU_2126 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2126" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2126Uncharacterized protein; Identified by Glimmer2; putative (129 aa)    
Predicted Functional Partners:
DVU_2127
Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092 (420 aa)
         
  0.874
DVU_2128
Uncharacterized protein; Identified by Glimmer2; putative (164 aa)
              0.844
DVU_2129
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF02518; match to protein family HMM TIGR00229 (823 aa)
   
        0.681
DVU_2125
TPR domain protein; Identified by match to protein family HMM PF00515 (371 aa)
              0.510
DVU_2124
Uncharacterized protein; Identified by similarity to OMNI-NTL01SM00146 (284 aa)
   
   
  0.489
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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