STRINGSTRING
DVU_2153 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2153" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2153annotation not available (1346 aa)    
Predicted Functional Partners:
DVU_2155
Uncharacterized protein; Identified by Glimmer2; putative (141 aa)
 
          0.965
DVU_2154
Tail assembly protein, putative; Identified by match to protein family HMM PF00877 (141 aa)
 
   
  0.911
DVU_2152
Uncharacterized protein; Identified by Glimmer2; putative (338 aa)
              0.848
DVU_2151
Uncharacterized protein; Identified by similarity to SP-P54342 (119 aa)
              0.845
DVU_2157
annotation not available (973 aa)
 
        0.824
DVU_2159
Uncharacterized protein; Identified by Glimmer2; putative (314 aa)
 
          0.705
DVU_1012
Hemolysin-type calcium-binding repeat protein; Identified by match to protein family HMM PF00092; match to protein family HMM PF00353; match to protein family HMM TIGR01612 (3038 aa)
   
 
  0.687
DVU_2156
Uncharacterized protein; Identified by Glimmer2; putative (121 aa)
              0.621
DVU_2101
Uncharacterized protein; Identified by similarity to OMNI-CC1604; match to protein family HMM PF04357 (1783 aa)
   
 
  0.568
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
 
  0.546
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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