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DVU_2165 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2165" - Lysozyme, putative in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2165Lysozyme, putative; Identified by match to protein family HMM PF01464 (166 aa)    
Predicted Functional Partners:
DVU_2166
Holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593 (132 aa)
 
          0.820
DVU_0475
annotation not available (146 aa)
   
          0.607
DVU_2164
annotation not available (136 aa)
              0.519
DVU_2163
Uncharacterized protein; Identified by Glimmer2; putative (54 aa)
              0.519
DVU_2168
Major head protein; Identified by match to protein family HMM PF03864 (341 aa)
              0.499
DVU_2167
Uncharacterized protein; Identified by Glimmer2; putative (69 aa)
              0.499
DVU_2170
Identified by match to protein family HMM PF01343 (406 aa)
              0.498
DVU_2169
Uncharacterized protein; Identified by similarity to GP-311850 (122 aa)
              0.497
DVU_2162
Uncharacterized protein; Identified by Glimmer2; putative (109 aa)
              0.490
DVU_2161
Uncharacterized protein; Identified by Glimmer2; putative (236 aa)
              0.490
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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