STRINGSTRING
DVU_2175 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2175" - Adenine specific DNA methyltransferase, putative in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2175Adenine specific DNA methyltransferase, putative; Identified by match to protein family HMM PF00271; match to protein family HMM TIGR01612 (1595 aa)    
Predicted Functional Partners:
DVU_1703
Type I restriction enzyme R Protein; Subunit R is required for both nuclease and ATPase activities, but not for modification (1099 aa)
   
   
  0.831
DVU_1710
Uncharacterized protein; Identified by similarity to GP-21114103 (192 aa)
   
 
  0.792
DVU_1705
Type I restriction-modification enzyme, S subunit; Identified by match to protein family HMM PF01420 (339 aa)
   
 
  0.792
DVU_2022
Uncharacterized protein; Identified by similarity to GP-28629295 (1158 aa)
   
   
  0.775
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.687
recD2
ATP-dependent RecD-like DNA helicase; DNA-dependent ATPase and ATP-dependent 5’-3’ DNA helicase. Has no activity on blunt DNA or DNA with 3’-overhangs, requires at least 10 bases of 5’-ssDNA for helicase activity (742 aa)
         
  0.678
DVU_2174
Uncharacterized protein; Identified by Glimmer2; putative (225 aa)
              0.674
DVU_2176
Uncharacterized protein; Identified by Glimmer2; putative (59 aa)
              0.606
DVU_0256
ATP-dependent RNA helicase, DEAD/DEAH box family; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271 (1121 aa)
         
  0.477
DVU_2836
Uncharacterized protein; Identified by Glimmer2; putative (148 aa)
   
          0.475
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (21%) [HD]