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DVU_2176 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2176" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2176Uncharacterized protein; Identified by Glimmer2; putative (59 aa)    
Predicted Functional Partners:
DVU_2175
Adenine specific DNA methyltransferase, putative; Identified by match to protein family HMM PF00271; match to protein family HMM TIGR01612 (1595 aa)
              0.606
DVU_2174
Uncharacterized protein; Identified by Glimmer2; putative (225 aa)
              0.492
DVU_2022
Uncharacterized protein; Identified by similarity to GP-28629295 (1158 aa)
   
        0.472
DVU_2043
Uncharacterized protein; Identified by similarity to GP-20095140 (533 aa)
     
        0.459
DVU_1728
Uncharacterized protein; Identified by similarity to GP-16506030 (138 aa)
     
        0.433
DVU_1508
Uncharacterized protein; Identified by similarity to GP-27550078 (135 aa)
     
        0.433
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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