STRINGSTRING
DVU_2185 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2185" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2185annotation not available (641 aa)    
Predicted Functional Partners:
DVU_2184
DNA-binding domain, excisionase family; Identified by match to protein family HMM TIGR01764 (72 aa)
              0.846
DVU_2872
Phage portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539 (566 aa)
 
     
  0.798
DVU_2171
Portal protein; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539 (517 aa)
 
     
  0.798
DVU_0197
Phage portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539 (566 aa)
 
     
  0.798
DVU_2186
Uncharacterized protein; Identified by Glimmer2; putative (337 aa)
              0.711
DVU_2168
Major head protein; Identified by match to protein family HMM PF03864 (341 aa)
 
          0.672
DVU_0189
Phage-plasmid primase, P4 family; Identified by match to protein family HMM PF03288; match to protein family HMM TIGR01613 (561 aa)
 
          0.623
DVU_2881
Phage-plasmid primase, P4 family; Identified by match to protein family HMM PF03288; match to protein family HMM TIGR01613 (561 aa)
 
          0.621
DVU_0199
Uncharacterized protein; Identified by similarity to OMNI-NTL01RS0859 (127 aa)
   
          0.577
AAS94683.1
Identified by similarity to OMNI-NTL01RS0859 (127 aa)
   
          0.577
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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