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DVU_2188 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2188" - Primase, putative in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
DVU_2188Primase, putative; Identified by match to protein family HMM PF01751; match to protein family HMM PF03288; match to protein family HMM TIGR01613 (830 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
   
  0.775
DVU_2878
Methyltransferase; Identified by match to protein family HMM PF01555; match to protein family HMM PF02195; Belongs to the N(4)/N(6)-methyltransferase family (452 aa)
 
   
  0.770
DVU_0192
Methyltransferase; Identified by match to protein family HMM PF01555; match to protein family HMM PF02195; Belongs to the N(4)/N(6)-methyltransferase family (452 aa)
 
   
  0.770
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins (493 aa)
   
 
  0.767
ssb
Single-stranded DNA-binding protein; Identified by similarity to SP-P02339; match to protein family HMM PF00436; match to protein family HMM TIGR00621 (176 aa)
     
 
  0.687
recD2
ATP-dependent RecD-like DNA helicase; DNA-dependent ATPase and ATP-dependent 5’-3’ DNA helicase. Has no activity on blunt DNA or DNA with 3’-overhangs, requires at least 10 bases of 5’-ssDNA for helicase activity (742 aa)
   
   
  0.685
DVU_2189
annotation not available (146 aa)
              0.610
DVU_1500
Major capsid protein, HK97 family; Identified by match to protein family HMM TIGR01554 (398 aa)
 
        0.601
DVU_0069
Uncharacterized protein; Identified by Glimmer2; putative (1467 aa)
   
 
  0.589
DVU_1503
Terminase, large subunit; Identified by match to protein family HMM PF03354 (565 aa)
 
     
  0.580
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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