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DVU_2202 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2202" - Peptidoglycan lytic exotransglycosylase in Desulfovibrio vulgaris Hildenborough
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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DVU_2202Peptidoglycan lytic exotransglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella; In the N-terminal section; belongs to the bacterial solute-binding protein 3 family (505 aa)    
Predicted Functional Partners:
DVU_1578
TPR domain protein; Identified by match to protein family HMM PF01435 (481 aa)
     
        0.495
nadC
Nicotinate-nucleotide pyrophosphorylase; Identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; Belongs to the NadC/ModD family (295 aa)
     
        0.495
DVU_1668
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (225 aa)
     
        0.493
DVU_3388
Lipoprotein, putative; Identified by match to protein family HMM PF01435 (275 aa)
     
        0.461
DVU_1584
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (356 aa)
     
        0.455
DVU_2439
Efflux transporter, RND family, MFP subunit; Identified by similarity to SP-P75830; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (411 aa)
     
        0.452
DVU_2375
Lipoprotein releasing system, permease protein; Identified by similarity to SP-P75956; match to protein family HMM PF02687 (411 aa)
     
        0.430
DVU_1587
Acetyltransferase, GNAT family; Identified by similarity to SP-P08205; match to protein family HMM PF00583 (154 aa)
     
        0.426
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (791 aa)
     
        0.422
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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