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tnaA protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"tnaA" - Tryptophanase in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnaATryptophanase; Identified by similarity to SP-Q59342; match to protein family HMM PF01212; Belongs to the beta-eliminating lyase family (462 aa)    
Predicted Functional Partners:
DVU_0867
Aromatic amino acid decarboxylase, putative; Identified by similarity to GP-6900962; match to protein family HMM PF00282 (497 aa)
         
    0.900
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate (257 aa)
         
  0.806
trpB-2
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine; Belongs to the TrpB family (395 aa)
         
    0.800
trpB-1
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (414 aa)
         
    0.800
DVU_2580
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF02518 (1373 aa)
           
  0.718
nhaC-2
Na+/H+ antiporter NhaC; Identified by similarity to SP-P27611; match to protein family HMM PF03553; match to protein family HMM TIGR00931 (475 aa)
           
  0.718
DVU_0331
Sensory box histidine kinase, putative; Identified by match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM TIGR00229 (973 aa)
           
  0.718
DVU_2205
Tryptophan-specific transport protein; Identified by similarity to SP-P22306; match to protein family HMM PF03222; match to protein family HMM TIGR00837 (425 aa)
   
   
  0.612
DVU_2203
Endoribonuclease, L-PSP family; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004 (124 aa)
              0.581
DVU_0462
Chorismate mutase/prephenate dehydratase; Identified by similarity to SP-P07022; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807 (391 aa)
           
  0.529
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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