Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_2297 | DVU_2298 | DVU_2297 | DVU_2298 | glycine/betaine/L-proline ABC transporter, periplasmic-binding protein; Identified by match to protein family HMM PF04069. | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | 0.999 |
| DVU_2297 | DVU_2299 | DVU_2297 | DVU_2299 | glycine/betaine/L-proline ABC transporter, periplasmic-binding protein; Identified by match to protein family HMM PF04069. | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | 0.999 |
| DVU_2297 | purM | DVU_2297 | DVU_1406 | glycine/betaine/L-proline ABC transporter, periplasmic-binding protein; Identified by match to protein family HMM PF04069. | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by similarity to SP:P08178; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | 0.469 |
| DVU_2297 | purN | DVU_2297 | DVU_0736 | glycine/betaine/L-proline ABC transporter, periplasmic-binding protein; Identified by match to protein family HMM PF04069. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.558 |
| DVU_2298 | DVU_2297 | DVU_2298 | DVU_2297 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | glycine/betaine/L-proline ABC transporter, periplasmic-binding protein; Identified by match to protein family HMM PF04069. | 0.999 |
| DVU_2298 | DVU_2299 | DVU_2298 | DVU_2299 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | 0.999 |
| DVU_2298 | DVU_2300 | DVU_2298 | DVU_2300 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Hypothetical protein; Identified by Glimmer2; putative. | 0.546 |
| DVU_2298 | DVU_2301 | DVU_2298 | DVU_2301 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Lipoprotein, putative. | 0.477 |
| DVU_2298 | pnp | DVU_2298 | DVU_0503 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.457 |
| DVU_2298 | purM | DVU_2298 | DVU_1406 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by similarity to SP:P08178; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. | 0.474 |
| DVU_2298 | purN | DVU_2298 | DVU_0736 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.578 |
| DVU_2298 | rplQ | DVU_2298 | DVU_1330 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.647 |
| DVU_2298 | rpsC | DVU_2298 | DVU_1309 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.557 |
| DVU_2298 | rpsD | DVU_2298 | DVU_1328 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.647 |
| DVU_2299 | DVU_2297 | DVU_2299 | DVU_2297 | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | glycine/betaine/L-proline ABC transporter, periplasmic-binding protein; Identified by match to protein family HMM PF04069. | 0.999 |
| DVU_2299 | DVU_2298 | DVU_2299 | DVU_2298 | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | 0.999 |
| DVU_2299 | DVU_2300 | DVU_2299 | DVU_2300 | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | Hypothetical protein; Identified by Glimmer2; putative. | 0.535 |
| DVU_2299 | DVU_2301 | DVU_2299 | DVU_2301 | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | Lipoprotein, putative. | 0.477 |
| DVU_2300 | DVU_2298 | DVU_2300 | DVU_2298 | Hypothetical protein; Identified by Glimmer2; putative. | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | 0.546 |
| DVU_2300 | DVU_2299 | DVU_2300 | DVU_2299 | Hypothetical protein; Identified by Glimmer2; putative. | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | 0.535 |
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