STRINGSTRING
DVU_2299 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2299" - Glycine/betaine/L-proline ABC transporter, ATP binding protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2299Glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP-P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186 (397 aa)    
Predicted Functional Partners:
DVU_2298
Glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP-P46921; match to protein family HMM PF00528 (283 aa)
  0.999
DVU_2297
Glycine/betaine/L-proline ABC transporter, periplasmic-binding protein; Identified by match to protein family HMM PF04069 (285 aa)
  0.997
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (515 aa)
   
 
  0.942
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (332 aa)
     
 
  0.816
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
   
 
  0.816
DVU_2970
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583; match to protein family HMM PF02629; match to protein family HMM TIGR01369 (898 aa)
     
 
  0.686
DVU_2302
Glutathione-regulated potassium-efflux system protein KefB, putative; Identified by similarity to OMNI-NTL01MM0929; match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (672 aa)
         
  0.656
DVU_1585
Vitamin B12-dependent methionine synthase family protein; Identified by similarity to SP-P37586; match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607 (804 aa)
         
  0.619
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family (1006 aa)
   
   
  0.549
gap-2
Glyceraldehyde-3-phosphate dehydrogenase; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (333 aa)
       
 
  0.528
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (18%) [HD]