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lolD protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"lolD" - Lipoprotein-releasing system ATP-binding protein LolD in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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lolDLipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner (233 aa)    
Predicted Functional Partners:
DVU_2375
Lipoprotein releasing system, permease protein; Identified by similarity to SP-P75956; match to protein family HMM PF02687 (411 aa)
  0.996
lysS
Lysine--tRNA ligase; Identified by similarity to SP-P41255; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA synthetase family (501 aa)
 
          0.899
DVU_2437
ABC transporter, permease protein; Identified by similarity to OMNI-NTL01TE1382; match to protein family HMM PF02687 (406 aa)
 
 
  0.872
DVU_3323
ABC transporter, permease protein; Identified by match to protein family HMM PF02687 (488 aa)
 
 
  0.804
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (791 aa)
   
   
  0.786
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (488 aa)
 
   
  0.709
DVU_2439
Efflux transporter, RND family, MFP subunit; Identified by similarity to SP-P75830; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (411 aa)
   
 
  0.705
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] (508 aa)
 
   
  0.661
DVU_3246
RND efflux system, outer membrane protein, NodT family; Identified by similarity to GP-19716262; match to protein family HMM PF02321; match to protein family HMM TIGR01845 (541 aa)
   
 
  0.644
DVU_2815
Outer membrane efflux protein; Identified by similarity to SP-Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845 (536 aa)
   
 
  0.644
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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