DVU_2389 protein (Desulfovibrio vulgaris Hildenborough)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0099	DVU_2383	DVU_0099	DVU_2383	TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	0.809
DVU_0099	DVU_2389	DVU_0099	DVU_2389	TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.863
DVU_0099	DVU_2806	DVU_0099	DVU_2806	TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.	MotA/TolQ/ExbB proton channel family protein; Identified by match to protein family HMM PF01618.	0.797
DVU_0099	tolQ-1	DVU_0099	DVU_2388	TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.	tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618.	0.800
DVU_0099	tolQ-2	DVU_0099	DVU_3099	TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.	tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618.	0.803
DVU_2383	DVU_0099	DVU_2383	DVU_0099	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.	0.809
DVU_2383	DVU_2384	DVU_2383	DVU_2384	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496.	0.659
DVU_2383	DVU_2386	DVU_2383	DVU_2386	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.618
DVU_2383	DVU_2387	DVU_2383	DVU_2387	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.608
DVU_2383	DVU_2389	DVU_2383	DVU_2389	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.822
DVU_2383	DVU_2390	DVU_2383	DVU_2390	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	TonB domain protein; Identified by similarity to GP:19577340; match to protein family HMM PF03544; match to protein family HMM TIGR01352.	0.937
DVU_2383	DVU_3101	DVU_2383	DVU_3101	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	tonB protein, putative; Identified by similarity to GP:14595286; match to protein family HMM TIGR01352.	0.834
DVU_2383	tolQ-1	DVU_2383	DVU_2388	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618.	0.766
DVU_2384	DVU_2383	DVU_2384	DVU_2383	ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496.	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	0.659
DVU_2384	DVU_2386	DVU_2384	DVU_2386	ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.968
DVU_2384	DVU_2387	DVU_2384	DVU_2387	ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.964
DVU_2384	DVU_2389	DVU_2384	DVU_2389	ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496.	Biopolymer transport protein, ExbD/TolR family; Identified by match to protein family HMM PF02472.	0.816
DVU_2384	DVU_2390	DVU_2384	DVU_2390	ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496.	TonB domain protein; Identified by similarity to GP:19577340; match to protein family HMM PF03544; match to protein family HMM TIGR01352.	0.796
DVU_2384	tolQ-1	DVU_2384	DVU_2388	ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496.	tolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618.	0.795
DVU_2386	DVU_2383	DVU_2386	DVU_2383	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.	0.618

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