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DVU_2407 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2407" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2407Uncharacterized protein; Identified by similarity to OMNI-NTL01PH01257 (166 aa)    
Predicted Functional Partners:
DVU_2408
Uncharacterized protein; Identified by Glimmer2; putative (92 aa)
              0.845
DVU_2409
Bacterial extracellular solute-binding proteins, family 3; Identified by match to protein family HMM PF00497 (270 aa)
              0.598
DVU_1370
Uncharacterized protein; Identified by Glimmer2; putative (290 aa)
   
          0.595
hmcA
High-molecular-weight cytochrome c; HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates (560 aa)
   
      0.566
DVU_2352
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (545 aa)
 
          0.545
DVU_0294
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (714 aa)
 
          0.544
DVU_3287
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (677 aa)
 
          0.542
DVU_2995
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534 (387 aa)
   
        0.535
DVU_2398
Uncharacterized protein; Identified by similarity to OMNI-TM0095 (163 aa)
 
          0.531
DVU_1266
Uncharacterized protein; Identified by Glimmer2; putative (1145 aa)
   
          0.529
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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