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DVU_2417 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2417" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2417annotation not available (73 aa)    
Predicted Functional Partners:
DVU_2416
Uncharacterized protein; Identified by similarity to GP-22294464; match to protein family HMM PF04543 (160 aa)
 
          0.873
DVU_1435
Membrane protein, putative; Identified by similarity to OMNI-NTL03PA01784 (394 aa)
   
 
      0.580
DVU_1104
annotation not available (243 aa)
   
          0.578
DVU_1111
Uncharacterized protein; Identified by Glimmer2; putative (561 aa)
   
          0.538
DVU_1110
Uncharacterized protein; Identified by Glimmer2; putative (148 aa)
   
          0.475
DVU_0378
Thioredoxin, putative; Identified by similarity to SP-P80579 (104 aa)
   
          0.456
DVU_1415
Identified by match to protein family HMM PF05170 (1194 aa)
   
          0.415
DVU_2434
Uncharacterized protein; Identified by Glimmer2; putative (135 aa)
   
          0.413
DVU_2415
Diadenylate cyclase; Identified by Glimmer2; putative (575 aa)
              0.411
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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