Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0082 | DVU_1772 | DVU_0082 | DVU_1772 | Conserved hypothetical protein; Identified by similarity to GP:12543284. | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | 0.983 |
| DVU_0082 | DVU_2290 | DVU_0082 | DVU_2290 | Conserved hypothetical protein; Identified by similarity to GP:12543284. | Hydrogenase, CooU subunit, putative; Identified by similarity to GP:1515470; match to protein family HMM PF00329. | 0.978 |
| DVU_0082 | DVU_2430 | DVU_0082 | DVU_2430 | Conserved hypothetical protein; Identified by similarity to GP:12543284. | Identified by match to protein family HMM PF00076. | 0.676 |
| DVU_0082 | acpP | DVU_0082 | DVU_1205 | Conserved hypothetical protein; Identified by similarity to GP:12543284. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.934 |
| DVU_1530 | DVU_1842 | DVU_1530 | DVU_1842 | Identified by match to protein family HMM PF00753. | Lipoprotein, putative. | 0.947 |
| DVU_1530 | DVU_2430 | DVU_1530 | DVU_2430 | Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF00076. | 0.805 |
| DVU_1530 | DVU_2619 | DVU_1530 | DVU_2619 | Identified by match to protein family HMM PF00753. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL03CP2311. | 0.946 |
| DVU_1530 | gpmA | DVU_1530 | DVU_1619 | Identified by match to protein family HMM PF00753. | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.944 |
| DVU_1530 | rpoA | DVU_1530 | DVU_1329 | Identified by match to protein family HMM PF00753. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.841 |
| DVU_1530 | rpoB | DVU_1530 | DVU_2928 | Identified by match to protein family HMM PF00753. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.891 |
| DVU_1772 | DVU_0082 | DVU_1772 | DVU_0082 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Conserved hypothetical protein; Identified by similarity to GP:12543284. | 0.983 |
| DVU_1772 | DVU_2290 | DVU_1772 | DVU_2290 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Hydrogenase, CooU subunit, putative; Identified by similarity to GP:1515470; match to protein family HMM PF00329. | 0.982 |
| DVU_1772 | DVU_2430 | DVU_1772 | DVU_2430 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Identified by match to protein family HMM PF00076. | 0.709 |
| DVU_1772 | acpP | DVU_1772 | DVU_1205 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.896 |
| DVU_1842 | DVU_1530 | DVU_1842 | DVU_1530 | Lipoprotein, putative. | Identified by match to protein family HMM PF00753. | 0.947 |
| DVU_1842 | DVU_2430 | DVU_1842 | DVU_2430 | Lipoprotein, putative. | Identified by match to protein family HMM PF00076. | 0.611 |
| DVU_1842 | gpmA | DVU_1842 | DVU_1619 | Lipoprotein, putative. | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.834 |
| DVU_1842 | rpoA | DVU_1842 | DVU_1329 | Lipoprotein, putative. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.766 |
| DVU_1842 | rpoB | DVU_1842 | DVU_2928 | Lipoprotein, putative. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.718 |
| DVU_2290 | DVU_0082 | DVU_2290 | DVU_0082 | Hydrogenase, CooU subunit, putative; Identified by similarity to GP:1515470; match to protein family HMM PF00329. | Conserved hypothetical protein; Identified by similarity to GP:12543284. | 0.978 |
page 1 of 3