STRINGSTRING
DVU_2434 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2434" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2434Uncharacterized protein; Identified by Glimmer2; putative (135 aa)    
Predicted Functional Partners:
DVU_2433
Uncharacterized protein; Identified by Glimmer2; putative (40 aa)
              0.845
DVU_1111
Uncharacterized protein; Identified by Glimmer2; putative (561 aa)
   
          0.679
DVU_1104
annotation not available (243 aa)
   
          0.676
DVU_0425
Uncharacterized protein; Identified by Glimmer2; putative (268 aa)
   
          0.630
DVU_1182
Uncharacterized protein; Identified by Glimmer2; putative (304 aa)
   
          0.620
DVU_0378
Thioredoxin, putative; Identified by similarity to SP-P80579 (104 aa)
   
          0.570
DVU_1435
Membrane protein, putative; Identified by similarity to OMNI-NTL03PA01784 (394 aa)
   
          0.558
DVU_1110
Uncharacterized protein; Identified by Glimmer2; putative (148 aa)
   
          0.538
DVU_1100
annotation not available (505 aa)
   
          0.515
DVU_1813
Uncharacterized protein; Identified by Glimmer2; putative (97 aa)
   
          0.507
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (17%) [HD]