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DVU_2437 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2437" - ABC transporter, permease protein in Desulfovibrio vulgaris Hildenborough
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
DVU_2437ABC transporter, permease protein; Identified by similarity to OMNI-NTL01TE1382; match to protein family HMM PF02687 (406 aa)    
Predicted Functional Partners:
DVU_2439
Efflux transporter, RND family, MFP subunit; Identified by similarity to SP-P75830; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (411 aa)
 
 
  0.914
DVU_3324
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005 (221 aa)
 
  0.891
lolD
Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner (233 aa)
 
 
  0.872
DVU_0125
Uncharacterized protein; Identified by Glimmer2; putative (377 aa)
 
 
  0.685
DVU_0062
RND efflux system, outer membrane protein, NodT family; Identified by similarity to SP-Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845 (504 aa)
 
 
  0.672
DVU_0058
Efflux transporter, RND family, MFP subunit; Identified by similarity to OMNI-CC1787; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (383 aa)
 
 
  0.667
DVU_2815
Outer membrane efflux protein; Identified by similarity to SP-Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845 (536 aa)
 
 
  0.665
DVU_3246
RND efflux system, outer membrane protein, NodT family; Identified by similarity to GP-19716262; match to protein family HMM PF02321; match to protein family HMM TIGR01845 (541 aa)
   
 
  0.663
DVU_3097
Outer membrane efflux protein; Identified by match to protein family HMM PF02321 (439 aa)
 
 
  0.649
DVU_3247
Efflux transporter, RND family, MFP subunit; Identified by similarity to GP-1707644; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (389 aa)
 
 
  0.646
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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