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DVU_2455 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2455" - Identified by match to protein family HMM PF01370 in Desulfovibrio vulgaris Hildenborough
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second shell of interactors
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
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Cooccurence
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[Homology]
Score
DVU_2455Identified by match to protein family HMM PF01370 (316 aa)    
Predicted Functional Partners:
ugd
UDP-glucose 6-dehydrogenase; Identified by similarity to SP-O54068; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721 (445 aa)
  0.972
DVU_3356
Identified by similarity to GP-5739472; match to protein family HMM PF01370 (335 aa)
       
0.907
DVU_3013
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (568 aa)
 
 
  0.642
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus (330 aa)
            0.605
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. GDP-mannose 4,6-dehydratase subfamily (381 aa)
   
 
0.589
DVU_2454
Uncharacterized protein; Identified by Glimmer2; putative (89 aa)
              0.564
DVU_2453
Uncharacterized protein; Identified by Glimmer2; putative (32 aa)
              0.564
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (391 aa)
     
 
  0.468
DVU_0134
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (345 aa)
 
 
  0.424
galE
UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01370; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family (331 aa)
   
 
0.420
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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