STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2491ABC transporter, ATP-binding protein; Identified by similarity to SP:P31060; match to protein family HMM PF00005. (632 aa)    
Predicted Functional Partners:
DVU_0104
Cation ABC transporter, permease protein, putative; Identified by similarity to SP:P44661; match to protein family HMM PF00950.
  
 
 0.919
DVU_1341
Cation ABC transporter, permease protein; Identified by similarity to GP:5019735; match to protein family HMM PF00950.
  
 
 0.919
modB
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 
 0.830
modA
Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Identified by similarity to SP:P37329; match to protein family HMM PF01547; match to protein family HMM TIGR01256.
    
 0.826
modC
Molybdenum ABC transporter, ATP-binding protein; Identified by similarity to SP:P37732; match to protein family HMM PF00005.
  
 
 
0.818
DVU_2490
Histidinol phosphatase, putative; Identified by similarity to SP:O34411; match to protein family HMM PF02231; match to protein family HMM PF02811; match to protein family HMM TIGR01856; Belongs to the PHP hydrolase family. HisK subfamily.
  
    0.795
DVU_0102
Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297.
  
  
 0.778
DVU_1343
Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297.
  
  
 0.778
DVU_0179
Molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family; Identified by similarity to SP:Q08385; similar to OMNI:CC3006; match to protein family HMM PF00589; match to protein family HMM PF03459; match to protein family HMM TIGR00638.
 
  
 0.580
DVU_0771
Molybdenum-pterin binding domain protein/site-specific recombinase, phage integrase family; Identified by similarity to SP:P46930; similar to OMNI:BR2031; match to protein family HMM PF00589; match to protein family HMM PF03459; match to protein family HMM TIGR00638.
 
  
 0.559
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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