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DVU_2496 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2496" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2496annotation not available (150 aa)    
Predicted Functional Partners:
DVU_2495
Identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369 (177 aa)
              0.745
htpX
Protease HtpX homolog; Identified by match to protein family HMM PF01435; Belongs to the peptidase M48B family (286 aa)
              0.550
DVU_2815
Outer membrane efflux protein; Identified by similarity to SP-Q51487; match to protein family HMM PF02321; match to protein family HMM TIGR01845 (536 aa)
           
  0.471
DVU_2286
Hydrogenase, CooM subunit, putative; Identified by similarity to GP-1515466; match to protein family HMM PF00361 (1253 aa)
           
  0.471
cheW-2
Chemotaxis protein CheW; Identified by similarity to SP-P07365; match to protein family HMM PF01584 (158 aa)
           
  0.471
DVU_1065
Peptidylprolyl isomerase; Identified by match to protein family HMM PF00639 (629 aa)
           
  0.471
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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