STRINGSTRING
DVU_2579 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2579" - TPR domain protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2579TPR domain protein; Identified by match to protein family HMM PF00515 (209 aa)    
Predicted Functional Partners:
DVU_2580
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF02518 (1373 aa)
 
 
 
  0.804
DVU_2581
Response regulator; Identified by match to protein family HMM PF00072 (146 aa)
     
      0.721
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity; Belongs to the heat shock protein 90 family (637 aa)
   
 
  0.592
DVU_2937
TPR domain protein/response regulator receiver domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00515 (451 aa)
   
 
 
  0.589
DVU_2582
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440 (195 aa)
     
      0.568
DVU_3272
TPR domain protein; Identified by match to protein family HMM PF00515 (207 aa)
   
          0.567
DVU_2544
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037 (271 aa)
   
      0.558
DVU_2125
TPR domain protein; Identified by match to protein family HMM PF00515 (371 aa)
   
          0.529
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
   
 
  0.526
dnaK
Chaperone protein DnaK; Acts as a chaperone (636 aa)
     
 
  0.517
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (11%) [HD]