STRINGSTRING
DVU_2590 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2590" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2590annotation not available (521 aa)    
Predicted Functional Partners:
rrf2
Protein rrf2; Identified by similarity to SP-P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738 (150 aa)
         
  0.718
roO
Rubredoxin-oxygen oxidoreductase; Identified by similarity to SP-Q9F0J6; match to protein family HMM PF00258; match to protein family HMM PF00753 (402 aa)
         
  0.698
DVU_2589
Uncharacterized protein; Identified by Glimmer2; putative (41 aa)
              0.572
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
           
  0.533
DVU_2588
DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486 (226 aa)
              0.459
DVU_2587
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518 (461 aa)
              0.459
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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