STRINGSTRING
DVU_2598 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2598" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2598Uncharacterized protein; Identified by Glimmer2; putative (184 aa)    
Predicted Functional Partners:
DVU_2599
Uncharacterized protein; Identified by Glimmer2; putative (147 aa)
              0.845
DVU_2596
Uncharacterized protein; Identified by Glimmer2; putative (259 aa)
 
          0.800
DVU_1714
Uncharacterized protein; Identified by similarity to GP-13186158 (697 aa)
 
          0.800
DVU_2604
Uncharacterized protein; Identified by similarity to GP-13186164 (569 aa)
 
          0.799
DVU_1721
Uncharacterized protein; Identified by Glimmer2; putative (550 aa)
 
          0.798
DVU_2899
Uncharacterized protein; Identified by Glimmer2; putative (286 aa)
   
          0.728
DVU_0357
Uncharacterized protein; Identified by similarity to OMNI-NTL02ML5790 (305 aa)
   
          0.681
DVU_2516
CBS domain protein; Identified by match to protein family HMM PF00571 (161 aa)
   
          0.679
DVU_2282
Uncharacterized protein; Identified by Glimmer2; putative (516 aa)
   
          0.628
DVU_0244
Uncharacterized protein; Identified by Glimmer2; putative (285 aa)
   
          0.617
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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