STRINGSTRING
DVU_2603 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2603" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2603Uncharacterized protein; Identified by Glimmer2; putative (135 aa)    
Predicted Functional Partners:
DVU_2604
Uncharacterized protein; Identified by similarity to GP-13186164 (569 aa)
              0.853
DVU_2605
Uncharacterized protein; Identified by Glimmer2; putative (144 aa)
              0.845
DVU_2602
Conserved domain protein; Identified by similarity to OMNI-NTL02SC5552 (227 aa)
              0.664
DVU_2606
Uncharacterized protein; Identified by Glimmer2; putative (99 aa)
              0.619
DVU_2607
Uncharacterized protein; Identified by Glimmer2; putative (208 aa)
              0.423
motA-3
Chemotaxis protein MotA; Identified by similarity to SP-P09348 (281 aa)
              0.407
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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