STRINGSTRING
DVU_2604 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2604" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2604Uncharacterized protein; Identified by similarity to GP-13186164 (569 aa)    
Predicted Functional Partners:
DVU_2603
Uncharacterized protein; Identified by Glimmer2; putative (135 aa)
              0.853
DVU_2605
Uncharacterized protein; Identified by Glimmer2; putative (144 aa)
              0.850
DVU_2598
Uncharacterized protein; Identified by Glimmer2; putative (184 aa)
 
          0.799
DVU_2596
Uncharacterized protein; Identified by Glimmer2; putative (259 aa)
 
          0.795
DVU_1714
Uncharacterized protein; Identified by similarity to GP-13186158 (697 aa)
 
          0.795
DVU_1715
Uncharacterized protein; Identified by Glimmer2; putative (195 aa)
   
          0.784
DVU_2899
Uncharacterized protein; Identified by Glimmer2; putative (286 aa)
   
          0.759
DVU_1724
annotation not available (534 aa)
 
          0.691
DVU_0455
Uncharacterized protein; Identified by Glimmer2; putative (255 aa)
   
          0.690
DVU_2611
annotation not available (519 aa)
 
          0.685
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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