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DVU_2620 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2620" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Experiments
Databases
Textmining
[Homology]
Score
DVU_2620Uncharacterized protein; Identified by similarity to OMNI-CC3039 (386 aa)    
Predicted Functional Partners:
DVU_2619
Uncharacterized protein; Identified by similarity to OMNI-NTL03CP2311 (242 aa)
 
          0.651
DVU_2580
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF02518 (1373 aa)
   
          0.508
DVU_1219
Uncharacterized protein; Identified by similarity to GP-6724082 (731 aa)
   
        0.463
DVU_1386
annotation not available (516 aa)
 
          0.458
DVU_0760
Uncharacterized protein; Identified by Glimmer2; putative (376 aa)
   
          0.457
DVU_0277
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165 (326 aa)
 
          0.439
DVU_0976
Response regulator; Identified by match to protein family HMM PF00072 (387 aa)
   
          0.439
DVU_2621
Uncharacterized protein; Identified by Glimmer2; putative (270 aa)
              0.423
DVU_1012
Hemolysin-type calcium-binding repeat protein; Identified by match to protein family HMM PF00092; match to protein family HMM PF00353; match to protein family HMM TIGR01612 (3038 aa)
   
          0.421
DVU_2618
Uncharacterized protein; Identified by Glimmer2; putative (54 aa)
              0.413
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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