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DVU_2683 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2683" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2683annotation not available (516 aa)    
Predicted Functional Partners:
DVU_0253
Oxidoreductase, FAD/iron-sulfur cluster-binding domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02913 (941 aa)
   
   
  0.900
DVU_2784
Dehydrogenase, FMN-dependent family; Identified by match to protein family HMM PF01070 (341 aa)
   
   
  0.848
DVU_3071
Oxidoreductase, FAD/iron-sulfur cluster-binding domain protein; Identified by similarity to SP-P52075; match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913 (1187 aa)
   
   
  0.788
DVU_1783
Cysteine-rich domain protein; Identified by match to protein family HMM PF02754 (250 aa)
   
   
  0.770
DVU_3026
Identified by similarity to SP-P33231; match to protein family HMM PF02652; match to protein family HMM TIGR00795 (570 aa)
   
     
  0.769
DVU_3032
Uncharacterized protein; Identified by similarity to OMNI-HP0137; match to protein family HMM PF02589 (209 aa)
   
   
  0.753
DVU_2451
Identified by match to protein family HMM PF02652; match to protein family HMM TIGR00795 (570 aa)
   
     
  0.722
DVU_3033
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754 (717 aa)
   
   
  0.717
DVU_0390
Glycolate oxidase, subunit GlcD, putative; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913 (460 aa)
   
   
  0.631
DVU_0671
Uncharacterized protein; Identified by similarity to OMNI-TM1058 (545 aa)
   
   
  0.550
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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